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Front Microbiol

Title:		Comparative Genomics Reveals Potential Mechanisms of Plant Beneficial Effects of a Novel Bamboo-Endophytic Bacterial Isolate Paraburkholderia sacchari Suichang626
Author(s):		Wang K; Wu Y; Ye M; Yang Y; Asiegbu FO; Overmyer K; Liu S; Cui F;
Address:		"State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, China. Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland. Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, and Viikki Plant Science Centre, University of Helsinki, Helsinki, Finland"
Journal Title:		Front Microbiol
Year:		2021
Volume:		20210618
Issue:
Page Number:		686998 -
DOI:		10.3389/fmicb.2021.686998
ISSN/ISBN:		1664-302X (Print) 1664-302X (Electronic) 1664-302X (Linking)
Abstract:		"Plant-beneficial microbes have drawn wide attention due to their potential application as bio-control agents and bio-fertilizers. Moso bamboo, which is among the monocots with the highest growth rate, lives perennially with abundant microbes that may benefit annually growing crops. Genome information of moso bamboo associated bacteria remains underexplored. We isolated and identified a novel Paraburkholderia strain Suichang626 from moso bamboo roots. Growth promoting effects of Suichang626 on both moso bamboo and seedlings of the model dicot Arabidopsis thaliana were documented in laboratory conditions. To gain insight into the genetic basis of this growth promotion effect, we sequenced the genome of Suichang626. Evidenced by genome-wide phylogeny data, we propose that Suichang626 is a novel strain of Paraburkholderia sacchari. Gene homologs encoding biosynthesis of the plant growth-promoting chemicals, acetoin and 2,3-butanediol, were identified in the genome of Suichang626. Comparative genomics was further performed with plant-beneficial and plant/animal pathogenic species of Paraburkholderia and Burkholderia. Genes related to volatile organic compounds, nitrogen fixation, and auxin biosynthesis were discovered specifically in the plant growth-promoting species of both genera"
Keywords:		Paraburkholderia bamboo comparative genomics genome growth-promoting bacteria;
Notes:		"PubMed-not-MEDLINEWang, Kai Wu, Ying Ye, Mengyuan Yang, Yifan Asiegbu, Fred O Overmyer, Kirk Liu, Shenkui Cui, Fuqiang eng Switzerland 2021/07/06 Front Microbiol. 2021 Jun 18; 12:686998. doi: 10.3389/fmicb.2021.686998. eCollection 2021"