| Title: | The Biological Diversity and Production of Volatile Organic Compounds by Stem-Inhabiting Endophytic Fungi of Ecuador |
| Author(s): | Rundell SM; Spakowicz DJ; Narvaez-Trujillo A; Strobel SA; |
| Address: | "Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520, USA. susan.rundell@yale.edu. Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA. daniel.spakowicz@yale.edu. Laboratorio de Biotecnologia Vegetal, Pontificia Universidad Catolica del Ecuador, Quito 17 01 21 84, Ecuador. anarvaez@puce.edu.ec. Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA. scott.strobel@yale.edu" |
| ISSN/ISBN: | 2309-608X (Electronic) 2309-608X (Linking) |
| Abstract: | "Fungal endophytes colonize every major lineage of land plants without causing apparent harm to their hosts. Despite their production of interesting and potentially novel compounds, endophytes-particularly those inhabiting stem tissues-are still a vastly underexplored component of microbial diversity. In this study, we explored the diversity of over 1500 fungal endophyte isolates collected from three Ecuadorian ecosystems: lowland tropical forest, cloud forest, and coastal dry forest. We sought to determine whether Ecuador's fungal endophytes are hyperdiverse, and whether that biological diversity is reflected in the endophytes' chemical diversity. To assess this chemical diversity, we analyzed a subset of isolates for their production of volatile organic compounds (VOCs), a representative class of natural products. This study yielded a total of 1526 fungal ITS sequences comprising some 315 operational taxonomic units (OTUs), resulting in a non-asymptotic OTU accumulation curve and characterized by a Fisher's alpha of 120 and a Shannon Diversity score of 7.56. These figures suggest that the Ecuadorian endophytes are hyperdiverse. Furthermore, the 113 isolates screened for VOCs produced more than 140 unique compounds. These results present a mere snapshot of the remarkable biological and chemical diversity of stem-inhabiting endophytic fungi from a single neotropical country" |
| Keywords: | Diaporthales biodiversity endophytic fungi monoterpenoids neotropics volatile organic compounds; |
| Notes: | "PubMed-not-MEDLINERundell, Susan M Spakowicz, Daniel J Narvaez-Trujillo, Alexandra Strobel, Scott A eng T15 LM007056/LM/NLM NIH HHS/ Switzerland 2015/12/02 J Fungi (Basel). 2015 Dec 2; 1(3):384-396. doi: 10.3390/jof1030384" |
