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Appl Environ Microbiol


Title:Butyric acid- and dimethyl disulfide-assimilating microorganisms in a biofilter treating air emissions from a livestock facility
Author(s):Kristiansen A; Lindholst S; Feilberg A; Nielsen PH; Neufeld JD; Nielsen JL;
Address:"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University, Sohngaardsholmsvej 49, DK-9000 Aalborg, Denmark"
Journal Title:Appl Environ Microbiol
Year:2011
Volume:20111014
Issue:24
Page Number:8595 - 8604
DOI: 10.1128/AEM.06175-11
ISSN/ISBN:1098-5336 (Electronic) 0099-2240 (Print) 0099-2240 (Linking)
Abstract:"Biofiltration has proven an efficient tool for the elimination of volatile organic compounds (VOCs) and ammonia from livestock facilities, thereby reducing nuisance odors and ammonia emissions to the local environment. The active microbial communities comprising these filter biofilms have not been well characterized. In this study, a trickle biofilter treating air from a pig facility was investigated and proved efficient in removing carboxylic acids (>70% reduction), mainly attributed to the primary filter section within which reduced organic sulfur compounds were also depleted (up to 50%). The secondary filter eliminated several aromatic compounds: phenol (81%), p-cresol (89%), 4-ethylphenol (68%), indole (48%), and skatole (69%). The active butyric acid degrading bacterial community of an air filter sample was identified by DNA stable-isotope probing (DNA-SIP) and microautoradiography, combined with fluorescence in situ hybridization (MAR-FISH). The predominant 16S rRNA gene sequences from a clone library derived from 'heavy' DNA from [(13)C(4)]butyric acid incubations were Microbacterium, Gordonia, Dietzia, Rhodococcus, Propionibacterium, and Janibacter, all from the Actinobacteria. Actinobacteria were confirmed and quantified by MAR-FISH as being the major bacterial phylum assimilating butyric acid along with several Burkholderiales-related Betaproteobacteria. The active bacterial community assimilating dimethyl disulfide (DMDS) was characterized by DNA-SIP and MAR-FISH and found to be associated with the Actinobacteria, along with a few representatives of Flavobacteria and Sphingobacteria. Interestingly, ammonia-oxidizing Betaproteobacteria were also implicated in DMDS degradation, as were fungi. Thus, multiple isotope-based methods provided complementary data, enabling high-resolution identification and quantitative assessments of odor-eliminating Actinobacteria-dominated populations of these biofilter environments"
Keywords:"Animals Bacteria/classification/genetics/isolation & purification/*metabolism Butyric Acid/*metabolism Disulfides/*metabolism *Environmental Microbiology Filtration/*methods *Housing, Animal In Situ Hybridization, Fluorescence Isotope Labeling *Livestock;"
Notes:"MedlineKristiansen, Anja Lindholst, Sabine Feilberg, Anders Nielsen, Per H Neufeld, Josh D Nielsen, Jeppe L eng Research Support, Non-U.S. Gov't 2011/10/18 Appl Environ Microbiol. 2011 Dec; 77(24):8595-604. doi: 10.1128/AEM.06175-11. Epub 2011 Oct 14"

 
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